Hi Damien,
The following code bins particles and makes a grid of pseudoatoms, putting
the count in the b-factor field and as radius. You should be able to
convert these to cubes using the script (but doing scaled spheres, and
coloring according to count is nifty too).
import numpy
def griddify(s
Hi Tsjerk,
As a matter of fact the replacement of atoms by cubes is possible with
cubes.py. However, this applet doesn't suit my project.
Indeed, I would like to get a script that describe your second guess!
D
Le 11/12/15 17:12, Tsjerk Wassenaar a écrit :
Hi Damien,
Do you mean replacing th
Hi Damien,
Do you mean replacing the atoms by cubes, or by binning the atoms on a 3D
grid and show these cubes if filled?
Cheers,
Tsjerk
On Fri, Dec 11, 2015 at 4:51 PM, Damien Clavel wrote:
> Good evening pymol users,
>
> I would like to represent a protein with a superimposed 3D grid of cub
