Re: [PyMOL] [EXTERNAL] How to install APBS on PyMol

2023-11-27 Thread Mooers, Blaine H.M. (HSC)
une 25, 2024 Co-Chair: Oklahoma Data Science Workshop<https://mediasite.ouhsc.edu/Mediasite/Channel/python> From: Luigi Marongiu, PhD Sent: Sunday, November 26, 2023 8:17 AM To: Luigi Marongiu, PhD Cc: Mooers, Blaine H.M. (HSC) ; pymol-users@lists.sourceforge.net Subj

Re: [PyMOL] [EXTERNAL] How to install APBS on PyMol

2023-11-26 Thread Luigi Marongiu, PhD via PyMOL-users
Hello, I installed PyMol 2.5.7 and ran APBS electrostatic. However, I got the error: Error encountered: No heavy atoms found. You may also see this message if PDB2PQR does not have parameters for any residue in your protein. The point is: I am evaluating molecules (acesulfame potassium, in this

Re: [PyMOL] [EXTERNAL] How to install APBS on PyMol

2023-11-26 Thread Luigi Marongiu, PhD via PyMOL-users
Hello, I am using Version 2.5.0, if I not mistaken, I installed it via apt-get: sudo apt-get -y install pymol In the legacy tab, there is nothing... Thank you On Saturday, November 25th, 2023 at 6:38 PM, Mooers, Blaine H.M. (HSC) wrote: > Hi Luigi , > > Please include the version of PyMOL

Re: [PyMOL] [EXTERNAL] How to install APBS on PyMol

2023-11-25 Thread Mooers, Blaine H.M. (HSC)
Hi Luigi , Please include the version of PyMOL that you are using. The APBS Tools are under the "legacy plugins" in the incentive version (2.5.7). These are absent in the open source PyMOL (2.5.0). There was a relatively recent change in the Python libraries used to generate the widgets in PyMOL.