rs-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of Gareth Stockwell
Sent: 24 May 2005 10:44
To: Grégori Gerebtzoff
Cc: 'Sara Nichols'; pymol-users
Subject: RE: [PyMOL] distance between aromatic residues
On Tue, 2005-05-24 at 11:34 +0200, Grégori Gerebt
On Tue, 2005-05-24 at 11:34 +0200, Grégori Gerebtzoff wrote:
> 3) define two interlaced loops and calculate the distance between all 6
> carbons of Phe1 with all 6 carbons of Phe2, either with cmd.dist or with
> simple mathematical functions; sum these distances
>
> 4) divide the result by 36, and
Hi Sara,
I don't think this is directly possible, since the centers of the aromatic
rings are not declared per se. But I see another way to obtain the result
you want, maybe this can be written as a small Python script (sorry I never
wrote any Python scripts, so I can't translate my idea!!).
The i
