RE: [PyMOL] Linux Beta Version with Sequence Viewer

2004-05-19 Thread Andrew Fant
Warren. I can't speak to the alignment tools, as I don't spend a lot of time in homology model building, but I would like to second the idea of adding the selection keywords. They would make my use of pymol that much easier. Andy --On Wednesday, May 19, 2004 09:32:17 -0700 Warren DeLano

RE: [PyMOL] Linux Beta Version with Sequence Viewer

2004-05-19 Thread Warren DeLano
> Sent: Wednesday, May 19, 2004 1:50 PM > To: Warren DeLano ; pymol-users-ad...@lists.sourceforge.net; > pymol-users@lists.sourceforge.net > Subject: RE: [PyMOL] Linux Beta Version with Sequence Viewer > > > > I think it would make sense to include everything (ions, &g

RE: [PyMOL] Linux Beta Version with Sequence Viewer

2004-05-19 Thread EPF (Esben Peter Friis)
ge.net Sent: 19-05-04 18:32 Subject: RE: [PyMOL] Linux Beta Version with Sequence Viewer Thanks for the input. > * sequence colors could (optionally?) match atom (C-alpha) > colors in the 3D view. Good idea. > * When a 3D-alignment is done, there is a sequence alignment behind. >

RE: [PyMOL] Linux Beta Version with Sequence Viewer

2004-05-19 Thread Warren DeLano
d...@lists.sourceforge.net] On Behalf Of > EPF (Esben Peter Friis) > Sent: Wednesday, May 19, 2004 4:58 AM > To: Warren DeLano; pymol-users@lists.sourceforge.net > Subject: RE: [PyMOL] Linux Beta Version with Sequence Viewer > > > Hi Warren > > This is GREAT! >

RE: [PyMOL] Linux Beta Version with Sequence Viewer

2004-05-19 Thread EPF (Esben Peter Friis)
Hi Warren This is GREAT! I was going to suggest this for the future development, but (as usual :-) you're ahead. Very good points: * possible to chose between atoms/1-letter residues/3-letter residues etc. * The background color of the scrollbar area shows a complete overview of the selectio