http://pymolwiki.org/index.php/Ball_and_Stick ?
You used the "handmade" method on that page. Generally, I like using the
preset better.
On Sun, Feb 1, 2015 at 11:42 PM, Seera Suryanarayana
wrote:
> Dear Pymol Users
> I would like to represent the protein what I have in ball and stick model.
> I
Dear Leila,
stick_ball setting can only be applied to whole object and not atoms for all
I know.
So, to do ball (oxygen) and sticks (hydrogen) representations is :
show sticks, solvent
show spheres, solvent and e. O
set sphered_scale, 0.3, solvent and e. O
You can adjust the size of the sphere
Tony,
First, enable stick_ball
show sticks
set stick_ball, on
That will put rounded-ends on sticks.
If you wall a ball & stick representation, then also do something like the
following:
set stick_radius, 0.12
set stick_ball_ratio, 2
And if you want bond valences as well:
set v
