Hi Annalisa,
Is the original coordinate file an NMR structure? It looks to me like
there are several copies of each atom, which is consistent with the pdb
file resulting from an NMR refinement. These will usually have several
different models of the peptide, all consistent with the NMR data.
You
Hi Andrew,
thank you for your answer: now I have a clue!
I knew that the structure is a NMR model, but what I didn't understand was
that some atoms were repeated (with different coordinates). Now I have
pruned my structure file and I can see a much more acceptable structure.
Thank you very much,
...@delsci.com
_
From: annalisa bordogna [mailto:annalisa.bordo...@gmail.com]
Sent: Thursday, December 18, 2008 6:40 AM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] weird visualization of a peptide structure
Hi all,
I have a little problem with the visualization of a peptide
Hi all,
I have a little problem with the visualization of a peptide conformation: as
you can see from the picture I enclose, the structure appears as if every
atom is bound to every neighbour atom. What (and how) can I set in PyMOL, to
visualize a correct structure?
Thank you very much for your he
