Re: [PyMOL] visualize mode

2015-06-19 Thread Emilio Xavier Esposito
Hi What about Modevectors? http://www.pymolwiki.org/index.php/Modevectors Emilio On Fri, Jun 19, 2015 at 10:23 AM, Command Line wrote: > Hi, that works for me. Albeit I would be more happy if there would be an > option directly inside pymol. Anyway, thanks. > > 2015-06-18 16:30 GMT-05:00 Osvald

Re: [PyMOL] visualize mode

2015-06-19 Thread Command Line
Hi, that works for me. Albeit I would be more happy if there would be an option directly inside pymol. Anyway, thanks. 2015-06-18 16:30 GMT-05:00 Osvaldo Martin : > Hi, > > Do you want to do something similar to porcupine plots? If so, check the > porcupine function in this Ipython notebook >

Re: [PyMOL] visualize mode

2015-06-18 Thread Osvaldo Martin
Hi, Do you want to do something similar to porcupine plots? If so, check the porcupine function in this Ipython notebook . Cheers, Osvaldo. On Thu, Jun 18, 2015 at 5:07 PM, Command Line wrote: Hi all, > wh

[PyMOL] visualize mode

2015-06-18 Thread Command Line
Hi all, when visualizing motion or modes (like NMA), is it possible to show the velocities as small arrows on all the moving atoms? B-values are not an option, since I want to see the 3D motion of the atoms. Thanks -- _