Dear Luisa,
2009/4/21 Maria Luisa Rodrigues :
> Dear all,
>
> Is there any PyMOL command to calculate surface areas?
> Many thanks,
>
Did you try to search for information yourself first?
Anyways, the pymolwiki.org is always a good place to go and then you
would have found something like this
Dear all,
Is there any PyMOL command to calculate surface areas?
Many thanks,
Luisa Rodrigues
Message-
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of Kaushik
Raha
Sent: Wednesday, November 12, 2003 2:50 PM
To: Harp, Joel M
Cc: pymol-users@lists.sourceforge.net
Subject: Re: [PyMOL] surface area calculation
To calculate surface
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
-Original Message-
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of Harp, Joel
M
Sent: Wednesday, November 12, 2003 2:10 PM
To: pymol-users@lists.sourceforge.
To calculate surface area for a defined object from the PyMOL command
line type:
print cmd.get_area("obj")
where obj is the name of your object.
for arginines:
create ARG, resn ARG
print cmd.get_area("ARG")
Kaushik.
On Wednesday, November 12, 2003, at 05:10 PM, Harp, Joel M wrote:
Is it
Is it possible to get pymol to calculate surface area for a defined
object? For instance, can it calculate surface area occupied by arginines.
Thanks,
Joel
Joel M. Harp
Vanderbilt University
