ers-boun...@lists.sourceforge.net
> > [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf
> > Of James Knight
> > Sent: Sunday, June 04, 2006 6:28 PM
> > To: Robert Immormino
> > Cc: pymol-users@lists.sourceforge.net
> > Subject: Re: [PyMOL] sticks
:28 PM
> To: Robert Immormino
> Cc: pymol-users@lists.sourceforge.net
> Subject: Re: [PyMOL] sticks don't touch backbone
>
> Thanks for the reply, but no luck. It seems the backbone can
> be refined using cartoon_refine, but there is a limit to how
> far. Unfortunately in som
Thanks for the reply, but no luck. It seems the backbone can be refined
using cartoon_refine, but there is a limit to how far. Unfortunately in
some cases the carbonyl (and the nitrogen as well) misses be a lot when
the area of interest is zoomed in on. I guess I just have to play with
the camera a
I'm trying to get a stick from the "C" carbon that is part of the
backbone to the "O" it is double bonded to. I use the command: "show
sticks, resi 100 and name c+o". I get a stick that doesn't touch the
backbone. If I turn off all smoothing (set cartoon_smooth_loops, 0; set
cartoon_flat_sheets, 0)
