Re: [PyMOL] separate two molecule as an object from a complex of four molecules

2023-08-03 Thread Norbert Straeter
Dear Shreya, one further possibility is to create a new object using the named chains: reinitialize fetch 6ous create trimer1, chain A+C+E+B+D+F disable 6ous alternatively, you could delete all other chains: reinitialize fetch 6ous remove not chain A+C+E+B+D+F It is usually necessary (or at l

Re: [PyMOL] separate two molecule as an object from a complex of four molecules

2023-08-03 Thread Saurabh Gayali
Have you tried this: https://pymolwiki.org/index.php/Split_object -- *Saurabh Gayali* Business Analyst [Excelra], Former Research Scientist [IGIB] saurabh.gay...@gmail.com / +91 8800412916 Bangalore, India [image: Mailtrack]

[PyMOL] separate two molecule as an object from a complex of four molecules

2023-08-02 Thread Mukhopadhyay, Shreya via PyMOL-users
Public Hello All, I am trying to separate out two molecules(one copy for each of RSVF F1 and F2) from one pdb (6OUS). It's a trimeric protein bound to a Fab. I want to separate out RSVF1 and F2 proteins as one object from the bound antibody, ie create one object with only chains A,C,E and B,D,