Re: [PyMOL] saved surface mesh is rotated/translated wrt atomic model

2010-09-09 Thread Raluca Mihaela ANDREI
I use these commands: cmd.reset() cmd.origin(position=[0,0,0]) cmd.center("origin") cmd.move('z',-cmd.get_view()[11]) Raluca On Thu, 09 Sep 2010 12:11:52 -0400 Philip Bransford wrote: > I am using PyMOL to generate a mesh of a protein. My >commands look like > this: > > load prot.pdb > sh

[PyMOL] saved surface mesh is rotated/translated wrt atomic model

2010-09-09 Thread Philip Bransford
I am using PyMOL to generate a mesh of a protein. My commands look like this: load prot.pdb show surface save surf.obj The mesh surf.obj (or surf.wrl) is rotated and translated relative to the atomic coordinates in prot.pdb. Is there some way to prevent this from happening? For my application