Hi Rob, Jenna,
Be aware that the symmetry data (symexp) need not be equal to the
biological unit transformations (remark biomt), even though it will
often match.
And since I'm posting anyway, here's another possibility:
load 1b8e.pdb, A
create B,A
alter_state 1,B,(x,y,z)=(-x,y,33.43-z)
Cheers,
Hello Jenna,
On Tue, 06 Apr 2010 00:36:38 -0400 JiangJiang Liu wrote:
> When I open the pdb file 1B8E (a homodimer protein) through
> pymol I can only see a monomer shown in the screen. Now I know the
> biological dimer is produced through crystallographic symmetry operations
> in
Jenna,
Use PyMOL to download the biological unit:
fetch 1b8e, type=pdb1
split the states out (you'll notice it's a two-state object)
split_states 1b8e
You can also create symmetry expansion via, A > Generate > Symmetry Mates >
within X A, from your original object.
Cheers,
-- Jason
On Tue,
Hello all,
When I open the pdb file 1B8E (a homodimer protein) through pymol
I can only see a monomer shown in the screen. Now I know the biological dimer
is produced through crystallographic symmetry operations in pymol. To generate
the dimer, I think I need to convert these
