Re: [PyMOL] issue with the allign command

2013-09-02 Thread Tsjerk Wassenaar
Hi Pascal, What platform is this, and what version of pymol are you using. Also, it works if you type the command, but does it work if you run the script from the terminal? Is it possible that the editor inserted some (invisible) control characters? Cheers, Tsjerk On Sat, Aug 31, 2013 at 3:16

[PyMOL] issue with the allign command

2013-08-31 Thread AUFFINGER Pascal (VIE)
Hi,I encountered a weird recent behavior of the command align.In a script where I use the commandalign (PO4 & name OP1+OP2+P), PO4_targetWhere PO4 is a selection of O3',O5",P,OP1,OP2 atoms as well as PO4_targetWhen I run the script with "pymol -c" I get the followingPyMOL>align (PO4 & name OP1+OP2+