Re: [PyMOL] draw the axes

2010-02-05 Thread Jason Vertrees
There's also: http://pymolwiki.org/index.php/Axes Just use the bounding box code for your boundaries. -- Jason On Fri, Feb 5, 2010 at 1:25 PM, Michael Zimmermann wrote: > go to: > http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ > > and check out showaxes.py > you can edit the Cylinder com

Re: [PyMOL] draw the axes

2010-02-05 Thread Michael Zimmermann
go to: http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ and check out showaxes.py you can edit the Cylinder commands to place the axes where you want them, if not the origin. On Fri, Feb 5, 2010 at 3:35 AM, peter hudson wrote: > Hello all > > I am working on a proetin having different domai

Re: [PyMOL] draw the axes

2010-02-05 Thread Pierre Rizkallah
Hi Peter, I have just been doing a similar exercise. The answer is to introduce two new atoms and draw a bond between them: 1. Choose two points along one of the dimensions (x, y or z) that would be the limits of the axis you want to draw. 2. Use the equation of the axis (vector) to calculate th

[PyMOL] draw the axes

2010-02-05 Thread peter hudson
Hello all I am working on a proetin having different domains. I would like to make movie and draw some axis on my structure which represent the axis of libration and translation. Movie would present the domain conformation changes and its relevence with biology. I checked on the pymol wiki but i f