Re: [PyMOL] disulphide bonds in pymol

2006-10-11 Thread Tsjerk Wassenaar
Hi Abhinav, Try: unbond r. cys and n. sg, r. cys and n. sg which removes all bonds present between sulphur atoms of cysteine residues. Best, Tsjerk On 10/11/06, Abhinav Verma wrote: Hello, pymol finds the disulphide bonds very nicely when you load a pdb file. What I want is, to tell hi

[PyMOL] disulphide bonds in pymol

2006-10-10 Thread Abhinav Verma
Hello, pymol finds the disulphide bonds very nicely when you load a pdb file. What I want is, to tell him not to do that. I need it for the fact that I need to set new values of dihedrals to the protein, and if there is a disulphide bond, then pymol just doesnt set the dihedrals. One way is to