Re: [PyMOL] check structures

2018-07-31 Thread Murpholino Peligro
Hi Mohammad, I do not know if PyMOL can do what you want. But... If you know how to refine using phenix*, and the pdb has electron density data, I suggest to refine and validate your structure. In the validation window, there is specific tab where one can see if the structure has missing atoms. If

[PyMOL] check structures

2018-07-31 Thread Mohammad Goodarzi
Hello, I would like to know how to check for missing or broken part of a PDB file using pymol? should i screen within each amino acid or there is a way to show it by pymol? Thanks Mohammad -- Check out the vibrant tech co