Re: [PyMOL] Write in a file the number of water at a distance from a

2011-09-22 Thread intra\sa175950
Thanks Marius With the second it works A bientot Stephane -Message d'origine- De : Marius Retegan [mailto:marius.s.rete...@gmail.com] Envoyé : jeudi 22 septembre 2011 18:02 À : intra\sa175950 Objet : Re: [PyMOL] Write in a file the number of water at a distance from a

[PyMOL] Write in a file the number of water at a distance from a

2011-09-22 Thread intra\sa175950
--- Message: 7 Date: Thu, 22 Sep 2011 11:14:36 +0200 From: Thomas Holder Subject: Re: [PyMOL] Write in a file the number of water at a distance from a protein surface To: ABEL Stephane 175950 Cc: "pymol-users@lists.sourceforge.net" Message-ID: <4e7afc7

Re: [PyMOL] Write in a file the number of water at a distance from a protein surface

2011-09-22 Thread Thomas Holder
Hi Stephane, you can select those waters using the "within" or "gap" selection operators. "within" measures from the atom centre, whereas "gap" takes the VDW radius into accout but selects everything beyond instead of near. Have a look at those examples: # use '... within ...' select firstshel