Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-08 Thread Thomas Holder
Hi Engin, the sequence viewer background and font colors are fixed in the latest open-source code (SVN rev 4041) and will be fixed in the next PyMOL release. Cheers, Thomas Engin Özkan wrote, On 09/04/13 19:59: > Hi everybody, > > Using MacPyMOL 1.6.0.0 Incentive Build, I no longer can see re

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-05 Thread Christoph Parthier
Hi, I experience the same with WinPyMOL 1.6.0.0 Incentive Build (running under Windows 7, NVidia Quadro 4000) - but not under Linux PyMOL 1.6.0.0. In addition I have the following related problem in WinPyMOL 1.6.0.0: when setting the background color (of the graphics window) to white, the back

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Engin Özkan
I forgot to explicitly say, this is only for the Sequence View panel, which has a black background regardless of the background parameter. And it applies to both sequence numbers and chain labels. Sequences themselves are displayed correctly. Engin On 9/4/13 12:59 PM, Engin Özkan wrote: > Hi e

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Oganesyan, Vaheh
Subject: Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white I forgot to explicitly say, this is only for the Sequence View panel, which has a black background regardless of the background parameter. And it applies to both sequence numbers and chain labels. Sequences

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Engin Özkan
mber 04, 2013 4:40 PM > To: pymol-users@lists.sourceforge.net > Subject: Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set > to white > > I forgot to explicitly say, this is only for the Sequence View panel, which > has a black background regardless of the background

[PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Engin Özkan
Hi everybody, Using MacPyMOL 1.6.0.0 Incentive Build, I no longer can see residue numbers in the sequence if the background is set to white. I have been playing with all the seq_view_* settings (thanks for documenting them clearly within the Edit All Settings window!), especially seq_view_labe