Re: [PyMOL] Secondary Structure Element from a PDB file

Hi Anna, On Sat, Aug 20, 2011 at 2:30 AM, Anna James wrote: > > Is there any program/code/software which can give me the secondary structure > region in a given PDB file ? > > like : > ./ executable pdb1.pdb > answer would be : > > alpha helical : 1- 8 residues > beta sheet : 17-29 residues > et

Re: [PyMOL] Secondary Structure Element from a PDB file

Thanks Robert Can you please give out some examples on how to use them? Please give out some appropriate links for stride and dssp Thanks again! Best Anna From: robert.fenw...@irbbarcelona.org Date: Sat, 20 Aug 2011 08:49:56 +0200 Subject: Re: [PyMOL] Secondary Structure Element from a PDB

[PyMOL] Secondary Structure Element from a PDB file

Is there any program/code/software which can give me the secondary structure region in a given PDB file ? like : ./ executable pdb1.pdb answer would be : alpha helical : 1- 8 residues beta sheet: 17-29 residues etc... so on OR can this be done in Pymol ,I tried using dss but I gues