Re: [PyMOL] Sausage representation

2017-04-27 Thread Thomas Holder
Hi Daniel, Apparently, no b-factors were assigned, or the CA positions in all states are identical. Here is a similar script, maybe that works better for you (uses “rmsf2b” from PSICO): run https://raw.githubusercontent.com/speleo3/pymol-psico/master/psico/editing.py fetch 1nmr, async=0 rmsf2

[PyMOL] Sausage representation

2017-04-27 Thread Daniel Munoz Escudero
Hello, I found in this repository http://muralab.org/~cmura/PyMOL/ an script (average3d.py) to perform the sausage representation in PyMOL. Although it works perfectly good with the pdbs given in the examples, I couldn't get the same results for my molecule. After performing all the RMSD calculati