Re: [PyMOL] Pymol for inorganic chemists - dealing with bonds

2015-11-21 Thread Osvaldo Martin
Hi, I think the options that Andreas propose are very good for your needs. Nevertheless, if you what to try, another option will be to use PyMOL CGO Cheers, Osvaldo. On Fri, Nov 20, 2015 at 4:10 PM, Andreas Warnecke < 4ndreas.warne...@gmail.com>

Re: [PyMOL] Pymol for inorganic chemists - dealing with bonds

2015-11-20 Thread Andreas Warnecke
Hej Henrique, not an inorganic chemist here, but some suggestions anyway: Metallic centers should be displayable as spheres using the *show*, or *show_as spheres* commands. The radius can be altered using: *set sphere_scale, value, selection* The bonds are more problematic. Pymol has some option

[PyMOL] Pymol for inorganic chemists - dealing with bonds

2015-11-19 Thread Henrique C. S. Junior
Dear Pymol users, As an inorganic chemist, to represent metallic centers and ligands in a comprehensive way is very important. I've tried to select my metallic centers and the atoms bonded directly to them, change this selection to ball and stick and keep all the rest as wireframe. Some bonds chang