Re: [PyMOL] Problematic PQS files

2005-04-28 Thread Gareth Stockwell
Andreas, > > > >You should probably have a look at the Macromolecular Structure > >Database (msd.ebi.ac.uk) - it contains proposed biological assemblies, > >calculated using an algorithm based on that used for PQS. You can > >download PDB-format files from the website. > > > > > > > So in wh

Re: [PyMOL] Problematic PQS files

2005-04-27 Thread Gareth Stockwell
Andreas, I think you'll find that if you delete the binary nastiness at line 268 of the file REMARK 300 THE BIOMOLECULE IS A MOLECULAR SPECIES OF TYPE it will load OK. This is clearly a bug in the PQS database. You should probably have a look at the Macromolecular Structure Database

[PyMOL] Problematic PQS files

2005-04-27 Thread Andreas Henschel
Hi, I am using PyMOL with PQS files , which supposedly come in PDB format but I encountered some problems with a few entries (eg. 1m90.mmol, ftp://ftp.ebi.ac.uk/pub/databases/msd/pqs/macmol/1m90.mmol) on opening: PyMOL>load 1m90.mmol Executive: object "1m90.mmol" created. ExecutiveWindowZoom-