Re: [PyMOL] Phosphorylation

2015-07-31 Thread Schubert, Carsten [JRDUS]
ransition to complete the loop" cmd.create("morph", "ERKP_2_ERK", source_state=0, target_state=-1) python end show cartoon, morph #show phospotyrosine show sticks, resn PTR and not (name n,c,o) From: Melanie Prakash [mailto:melanie.prak...@gmail.com] Sent: Wednesday,

[PyMOL] Phosphorylation

2015-07-30 Thread Melanie Prakash
Hi! Recently, i have been trying to assemble a PyMol video of the phosphorylation of the MAP kinase ERK from deactivated to activated to deactivated stages. While I have had success showing the conformational change from inactivated to activated (using *morph mout, 1ERK, 2ERK*), not only am I not