Re: [PyMOL] Pair_fit syntax

2016-10-25 Thread Subha K
Hi Spencer, Thanks a lot for that very useful information. Regards, Subha On Tue, Oct 25, 2016 at 4:48 AM, Spencer Bliven wrote: > First off, when the documentation includes square brackets in the command > it indicates optional arguments. You don't include them in the command > itself. In thi

Re: [PyMOL] Pair_fit syntax

2016-10-25 Thread Spencer Bliven
First off, when the documentation includes square brackets in the command it indicates optional arguments. You don't include them in the command itself. In this case, pair_fit takes alternating selections from obj1 and obj 2. It also requires that the number of atoms in each selection be equal. I u

[PyMOL] Pair_fit syntax

2016-10-20 Thread Subha K
Hi there, Could somebody please help me with the correct syntax for pair fit? I tried this, but this doesn't work. pairfit (obj2 and resi 256-510), (onj1 and resi 1-255), [(obj2 and resi 1-255), (obj1 and resi 256-510), [(obj2 and resi 766-1020), (obj1 and resi 511-765), [(obj2 and resi 511-765)