Hi Jared,
Thank you for teaching me that special feature on pymol; on my pymol
version set label_position worked (instead of set label_offset).
Neena
On Sun, 31 Jan 2021 at 20:17, Jared Sampson
wrote:
> Hi Neena -
>
> There is also a `label_offset` setting, which can be given an x,y,z vector
>
Or you can use "3 button edit mode" with a combination of Control (on a
Mac) and the left mouse button. It allows you to move the label in first
2Ds, release, rotate and do it again to position exactly where you want it,
e.g. in front, behind etc.
BW Jon
On Mon, 1 Feb 2021 at 21:23, Jared Sampson
Sorry, I replied from my phone earlier...the correct setting is
`label_position`. https://pymolwiki.org/index.php/Label_position
Best,
Jared
On Sun, Jan 31, 2021 at 8:17 PM Jared Sampson
wrote:
> Hi Neena -
>
> There is also a `label_offset` setting, which can be given an x,y,z vector
> in vie
Hi Neena -
There is also a `label_offset` setting, which can be given an x,y,z vector
in viewport coordinates. So if you want all labels to be in the foreground
compared to their respective atom(s), you might set it via:
set label_offset, [0,0,5]
I believe this can also be done in an object-spec
Hi Ali,
Thank you for the brief and thorough explanation! All those commands gave
exactly what I was looking for!
Many thanks,
Neena
On Fri, 29 Jan 2021 at 18:36, Ali Saad Kusay
wrote:
> Hi Neena,
>
> A simple way to label in PyMOL is to simply select the atom you want and
> enter the followin
Hi Neena,
A simple way to label in PyMOL is to simply select the atom you want and enter
the following command:
label sele, "what you want to label"
I.e. for the N:
label sele, "N"
PyMOL can render the special ⨁ you are using, through unicode:
label sele, '\u2A01'
Visit the wiki for more info
Hello PyMOL users,
Is there a way to label charge sites and termini on PyMOL as I have shown
in the below figure instead of using Paint?
In addition, is there a way to check color contrast for this peptide
structure for making it more accessible to the readers?
[image: image.png]
Many thanks,
Neen
