Hi Phil,
one option to get access to the coordinates is using the chempy model of a
given selection ( named "(sele)" if you clicked it).
m = cmd.get_model("(sele)")
the chempy model contains a list of atom objects which contain most properties
you might need.
for atom in m.atom:
print at
Phil,
The answers to your questions lie in the "iterate," "iterate_state,"
"alter," and "alter_state" commands. The PyMOLWiki has extensive
documentation on these commands
(http://pymolwiki.org/index.php/Iterate). Once you select something
with the mouse you can get information using iterate/alt
I am writing a Pymol plugin, in which I need to extract, manipulate, and
replace the coordinates of selected atoms. Are there examples out there
I could use as a prototype?
For starters, what command(s) do I use to get the name strings of
residues that I've selected with mouse clicks. I would li
