Hello Hidhi,
On Wed, 2014-07-23 16:39 EDT, Nidhi Jatana
wrote:
> Dear Sir/Madam
> I have generated five models for a protein and I wanted to check how the
> models align to each other and color them by RMSD/RMSF. I wanted to know
> what should be the ideal way to do it. Shall I use RMSF or RMS
Hej Nidhi,
I'm not familiar with the two scipts but the usage appears correct. You can
check the arguments in PyMOL using e.g.:
rmsf_states ?
and/or:
help rmsf_states
I assume the color_b command is a simplification of the spectrum command,
so you could also check out:
http://www.pymolwiki.org/in
Dear Sir/Madam
I have generated five models for a protein and I wanted to check how the
models align to each other and color them by RMSD/RMSF. I wanted to know
what should be the ideal way to do it. Shall I use RMSF or RMSD for the
same?
I tried doing this using rmsf_states.py and color_b.py scri
