Hello Karen,
Predicting protein complexes structures is "docking". Pymol should not be
used for this. I would advise you to look at docking software that allows
for symmetrical molecules, such as HADDOCK (http://haddocking.org/) or
SymmDock (http://bioinfo3d.cs.tau.ac.il/SymmDock/).
Best,
João [
Hi,
A fragment of my protein is predicted by I-TASSER to be similar to a
homodimer module. But the predicted pdb file (named copy) is only a
monomer. Can I generate a dimer using pymol? I tried symexp sym, copy,
copy, 2.5, which would work for other known pdb file, but got the error
message "no s
