Re: [PyMOL] Color starting midway between adjacent chains

2014-03-04 Thread I-Ji Jung
Hi David, Thanks. But what about between all chains? I mean, so between chains B and C and so on. I need a generic script that can be applied for any protein. Thanks! ?? ??: David Hall ?? ??: ?2014?? ?3?? ?4?? ?2?:?57 ?? ??: I-Ji Jung

Re: [PyMOL] Color starting midway between adjacent chains

2014-03-03 Thread David Hall
set_bond line_color, color_name, n. CA+CB will color all bonds between CA and CB whatever color you put in as color_name If you're doing sticks instead of lines, you should use set_bond stick_color, color_name, n. CA+CB -David On Mon, Mar 3, 2014 at 10:01 PM, I-Ji Jung wrote: > Hi everyo

[PyMOL] Color starting midway between adjacent chains

2014-03-03 Thread I-Ji Jung
Hi everyone, I have just started learning Pymol and PyMol seems to use a different colour convention than Molmol, i.e. the colour of a side chain starts half way between the CA and CB atoms (instead of starting at the CA). Do you know whether there would there be a way to start the side chain c