Hi Prija,
You can do it with a bit of Python
ss = [ i.ss for i in cmd.get_model("n. ca").atom ]
print "Helix content: %5.2f%%" % (100.0*ss.count("H")/len(ss))
print "Sheet content: %5.2f%%" % (100.0*ss.count("S")/len(ss))
The first line gets a list of the secondary structure flags of the
selecti
Hello
Can we calculate percentage secondary structural element using Pymol or
please suggest me some other program for this purpose
Prija
--
Prija Ponnan
--
This SF.net email is sponsored by Sprint
What will you do first
