Re: [PyMOL] Building of the Carbon lattice

users@lists.sourceforge.net > Subject: Re: [PyMOL] Building of the Carbon lattice > > Hi Mike, > > I simply measured x_shift and y_shift from a cyclohexane fragment. Use > the graphical Builder or the "fragment" command to load stuff from the > fragment library. >

Re: [PyMOL] Building of the Carbon lattice

Hi Mike, I simply measured x_shift and y_shift from a cyclohexane fragment. Use the graphical Builder or the "fragment" command to load stuff from the fragment library. PyMOL> fragment cyclohexane Cheers, Thomas Mike Marchywka wrote, On 01/04/13 15:44: > Where do you get the x_shift and y_shi

Re: [PyMOL] Building of the Carbon lattice

hanks. Date: Fri, 4 Jan 2013 11:13:39 +0100 From: spel...@users.sourceforge.net To: jmsstarli...@gmail.com CC: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] Building of the Carbon lattice Hi James, just calculate the coordinates and write them out i

Re: [PyMOL] Building of the Carbon lattice

Hi James, just calculate the coordinates and write them out in PDB format, quite simple task. Try the attached script. Cheers, Thomas James Starlight wrote, On 01/04/13 09:14: > Hi Mike, > > Chimera can build such lattices by means of it's build structure > module. On other hand I want to bui

Re: [PyMOL] Building of the Carbon lattice

mail.com > To: pymol-users@lists.sourceforge.net > Subject: Re: [PyMOL] Building of the Carbon lattice > > Hi Tsjerk! > > This is the example of such lattice which I've built using Chimera! > http://imageshack.us/photo/my-images/543/lattice.png/ > > this is simple model o

[PyMOL] Building of the Carbon lattice

Dear PyMol users! I'd like to build simple 2D lattice model consisted of the Carbon atoms connected by the single bonds. Could you provide me with some script which can build such lattices of the desired dimensions ? Thanks for help James --