Re: [PyMOL] Atom selection based on Hydrogen Bonding Partners

2010-05-10 Thread Michael Zimmermann
I suppose you could modify this script to show sticks when you find a H-bond pair. Delete the parts that make the dashed line and label and replace them with "show sticks" or add them to a selection. http://www.ebi.ac.uk/~gareth/pymol/downloads/scripts/hbond.py Not the nicest solution, but maybe

[PyMOL] Atom selection based on Hydrogen Bonding Partners

2010-05-09 Thread phani ghanakota
Hi, I have been using the dist command with mode=2 to show hydrogen bonds around a ligand. Is there a way to make a selection of all the residues in a protein hydrogen bonding with a ligand, so that I can show them as sticks. Thanks in Advance.