Hi James,
The menu action uses the "dss" command, so the result should be exactly
the same.
Remove loops:
PyMOL> remove not ss H+S
There are several h_bond settings which tune the dss command:
PyMOL>grepset h_bond
h_bond_cone : 180.0
h_bond_cutoff_center : 3.6
h_bond_cutoff_edg
Dear PyMol users!
I'm working with the big pdb ensemble wich lack information about the
secondary structure ( deleated header region)
I want to find possible way to assign secondary structure for all pdb's in
my ensemble ( like A-> assign sec.str for specified pdb). Finally I want to
deleate some
