Re: [PyMOL] Active site in Pymol

Hi, you can use the Measurement Wizard to get distances between atoms. PyMOL will also print the residue type in the console if you click on any atom. Best, Julian On Tue, Aug 23, 2016 at 8:45 AM Farzaneh Namazifar < f.namazifar706...@gmail.com> wrote: > Hi Dear all; > I am a PyMol user. I re

Re: [PyMOL] Active site in Pymol

Hi Farzaneh - Are you looking for something programmatic to use for many different structures, or just analyzing a single structure? With just one structure (or a few) you can do most of this using the GUI by eye. 1. To find the length of each H-bond involving your ligand, (let's say the objec

[PyMOL] Active site in Pymol

Hi Dear all; I am a PyMol user. I read the PyMOL tutorial about the hydrogen bond. I need some informations about hydrogen bond like: 1- length of hydrogen bond between two residue 2- which kind of residues ar