Surely there must be a way to run Pymol in a mode that does not fire
up the GUI but still allows it access to OpenGL??
> Michael,
>
> The "-c" option forces PyMOL to run in command-line-only mode which means it
> doesn't have access to the OpenGL hardware (used by cmd.draw and interactive
> gra
Hi Doug -
You can launch PyMOL with the -c flag for command line only (no GUI). See
http://www.pymolwiki.org/index.php/Command_Line_Options for more details.
Cheers,
Jared
--
Jared Sampson
Xiangpeng Kong Lab
NYU Langone Medical Center
http://kong.med.nyu.edu/
On Nov 11, 2014, at 2:56 PM,
Thanks everyone, that works a treat.
Quoting Matthew Baumgartner on Tue, 11 Nov 2014
15:10:38 -0500:
> Hi Doug,
> Check out these pages on integrating PyMOL into a python script.
> Essentially you will write a python script that imports pymol. From
> there you can do things like load objec
Hi Doug,
Check out these pages on integrating PyMOL into a python script.
Essentially you will write a python script that imports pymol. From
there you can do things like load objects, align them, or anything else.
http://www.pymolwiki.org/index.php/Python_Integration
http://www.pymolwiki.org/
Hi Doug,
Please see the batch mode option:
http://www.pymolwiki.org/index.php/Command_Line_Options
I ran into some issues under Win
(http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg12855.html),
but it works fine on my Ubuntu.
Vitaly
On Tue, Nov 11, 2014 at 1:56 PM, Douglas Houst
Hi all,
Does anyone know if there's a way of accessing Pymol's API without the
GUI? There are some useful functions in there and my loops would
iterate a lot faster if the GUI didn't fire up every time.
cheers,
Doug
_
Dr. Douglas R. Houston
