[PyMOL] partially transparent structure

2008-02-13 Thread kosa
I would like to display a protein structure in the following way: The first domain of the structure in red cartoons The second domain of the structure in gray TRANSPARENT cartoons I tried splitting the structure into two objects but because the transition from the first domain to the second one i

[PyMOL] saving multiple object in one pdb file

2005-11-20 Thread kosa
Dear users, I had generated many symmetry mates of my structure using pymol symexp command. I got many objects generated. Each contains one symmetry related molecule. Now I want to save all objects in one pdb file. I do "Select all", create new object from this selection and save the object a