Mr. Thomas Holder,
Many thanks for your help.
I can manage it.
Best regards,
Koji
2019年6月26日(水) 18:56 Thomas Holder :
> Hi Koji,
>
> Yes it is my understanding that sphere_scale 1.1932 would correspond to
> 30% probability.
>
> Cheers,
> Thomas
>
> > On Jun 25
0 -
> 1)
> pradius = problevel[iprob]
>
> cmd.set('sphere_scale', pradius * cmd.get_setting_float('ellipsoid_scale'))
>
> Hope this helps.
>
> Cheers,
> Thomas
>
>
> > On Jun 24, 2019, at 7:21 AM, koji naka wrote:
> >
> > Dear a
Dear all,
The size of isotropic atoms plotted by using "alter all, vdw =
sqrt(b/8)/pi" and "show sphere" looks small compared with the size of
anisotropic atoms displayed by "show ellipsoid" in PyMOL default setting
with 50% probability.
How can I plot the isotropic atoms with 50% probability?
T
