Hi,
I'm trying to install PyMOL-v1.5.0.4-Linux-x86_64 on Linux Mint 13.
After successful unpacking, "sh"-ing and copying into /usr/local/bin/pymol
I tried to execute Pymol from the terminal, but error came out:
vitali@vs-Think ~/install/pymol $ pymol
/home/vitali/install/pymol/pymol.exe: 1:
/hom
f so, what's in it? For the new
> graphics to perform, you need the "use_shaders" setting turned on.
>
> Cheers,
>
> -- Jason
>
> On Thu, Feb 16, 2012 at 2:09 PM, Vitali Stanevich
> wrote:
> > Jason,
> >
> > I did install latest driver for a
ics drivers for your card?
>
> Cheers,
>
> -- Jason
>
> On Tue, Feb 14, 2012 at 5:27 PM, Vitali Stanevich
> wrote:
> > Hi,
> >
> > I recently installed a new version of licensed pymol 1.5. It works ok
> with
> > small molecules (<25 kDa). But, unfor
Hi,
I recently installed a new version of licensed pymol 1.5. It works ok with
small molecules (<25 kDa). But, unfortunately, I found that after I load
relatively large molecules (>60 kDa) everything really slows down,
movements become somewhat abrupt and etc. At the same time, I can open this
mol
now using Pymol I
> can label these residues, but is there any way to depict these hydrogen
> bonds also and the distances?
>
> Dr. Jayashree Ramana
>
> <http://www.juit.ac.in/bio/jsr.php>
>
> ------
> *From:* Vitali Stanevich
> *To:
check this out:
http://www.pymolwiki.org/index.php/InterfaceResidues
if you want faster and easier, but less reliable (in my opinion) way, you
can analyze your .pdb with PISA:
http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html
vitali
On Sun, Nov 20, 2011 at 1:51 AM, rjayashree13-scie...@yahoo.co
one more thing: ffmpeg script at that link didn't work for me so i had to
modify it like that
ffmpeg -f image2 -qscale 5 -r 24 -b 9600 -i image%d.png movie.mpg
On Wed, Nov 9, 2011 at 11:22 PM, Vitali Stanevich wrote:
> have a look at this link:
>
> http://strucbio.biologie.u
have a look at this link:
http://strucbio.biologie.uni-konstanz.de/ccp4wiki/index.php/Morph_with_Chimera
disregard morph part. you can modify script to contain "frames" instead of
"states". i installed ffmpeg from repositories on ubuntu and don't remember
any issues with kodecs.
vitali
On Wed, N
