Re: [PyMOL] Can I easily specify an alignment to use in the sequence display?

2018-01-17 Thread Tony Lewis
gt; ago which uses biopython and emboss. If you're using Linux or MacOS, > everything is prepackaged for you in Anaconda Cloud. For installation > instructions and examples, see: > https://pymolwiki.org/index.php/Load_aln > > Cheers, > Thomas > > > On Jan 11,

[PyMOL] Can I easily specify an alignment to use in the sequence display?

2018-01-11 Thread Tony Lewis
Dear PyMOL people, Please can anyone tell me whether there's an easy way to use an alignment of the residues in the displayed structures (say, from a FASTA file) to align the residues shown in the sequence display? I would find this a very powerful feature. Many thanks for any help. Tony

Re: [PyMOL] How to select nucleic/protein separately

2017-12-15 Thread Tony Lewis
is good enough but please can anyone tell me if there's a better way I could be doing it? Many thanks for any help. Tony Lewis On 30 November 2017 at 12:00, Tony Lewis wrote: > Dear PyMOL people, > > Please can anyone tell me if there's a standard way to select either of >

Re: [PyMOL] How to select nucleic/protein separately

2017-12-07 Thread Tony Lewis
Hi Thomas, Thanks very much for your reply. That's really helpful - your suggestion looks much better than the resn command I was previously using. Kind regards, Tony Lewis On 7 December 2017 at 09:02, Thomas Holder wrote: > Hi Tony, > > Unfortunately, PyMOL knows only temp

[PyMOL] How to select nucleic/protein separately

2017-11-30 Thread Tony Lewis
should be accessing this info from PyMOL rather than trying to hack together a list of resn values. Many thanks for any help. Tony Lewis -- Check out the vibrant tech community on one of the world's most engaging