Hello PyMOLers,
I have a GPCR protein molecule (pdb file) whose structure I would like to
visualize, but instead of seeing the entire structure as one entity, I would
like to separate it, somehow as if I was using an imaginary plane to "chop"
the protein into two entities (extracellular interface,
Hello PyMOLers,
A quick question on the surface model, is there anywhere where I can learn
how molecules are color-coded. The default scheme has green, red, and bits
of yellow (I know the accessible to solvents surface is what is shown, but
I'm not sure what red, green, and yellow bits mean)? Also
Dear PyMOLers,
I should say that this isn't a PyMOL-specific question, for that I apologize
but I imagine several users on this mailing list will have experience
in sequence/structure analysis, that is the reason for posting it. I am
using a database that stores motifs sequences describing several
Hello PyMOLers,
A visualization query:
I have a PDB structure of a GPCR to which I have added two selections, one
where I highlight certain motif sequences extracted from a database, and the
second where I highlight a set
of residues that bind ligands. Because I wish to determine if I can
correla
archive.
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> Andreas
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> On 16/06/2011 9:09, Spyros Charonis wrote:
>
>> Hi Andreas,
>>
>> That was a slip of my finger - OS X 10.6 is what I mean. As you say,
>> 10.7 has still not been released. pymol -M does in fact solve the
>>
Dear PyMOL community,
My PyMOL application is exhibiting flickering whenever I launch it. I
running on a Intel Core 2 duo on OS X 10.7. This happens without loading
any
PDB structures, simply by launching the program. Has this been encountered
before?
Spyros
--
Dear PyMOL community,
I'm trying to get started with PyMOL, and the compilation is going wrong.
After running " python steup.py install " on the terminal (I'm using OS X
Snow Leopard) it complains with:
GLEW_OK’ undeclared (first use in this function)
lipo: can't open input file:
/var/folders/Bh/B
