[PyMOL] how to save coordinate for cut DNA

2010-06-07 Thread Sangita Kachhap
an anybody suggest me how to save coordinate for cut DNA. With regard Sangita Kachhap JRF BIC,IMTECH CHANDIGARH -- ThinkGeek and WIRED's GeekDad team up for the Ultimate GeekDad Father's Day Giveaway. ONE MASSIVE

[PyMOL] how to cut covalent bond

2010-06-04 Thread Sangita Kachhap
Hello all I have to cut phosphodiester bond.Is it possible to cut it using pymol? If possible can anybody explain it. With regard Sangita Kachhap JRF BIC,IMTECH CHANDIGARH -- ThinkGeek and WIRED's GeekDad te

[PyMOL] how to add Mg2+ in protein

2010-06-02 Thread Sangita Kachhap
Hello all I am new user for pymol.Is it possible to add Mg2+ in enzyme catalytic site using pymol? If possible then can anybody give me idea about how I can add Mg2+ in protein? With regard Sangita Kachhap JRF BIC,IMTECH CHANDIGARH

[PyMOL] To generate dimer MspI-DNA complex

2010-04-18 Thread Sangita Kachhap
hello pymol users Myself sangita i have a protein MspI(MspI monomer bounded with double stranded DNA),i want to make dimer of it bounded with single double stranded cognate DNA sequence.Is it possible to make this using pymol With regards Sangita Kachhap JRF BIC,IMTECH CHANDIGARH