Re: [PyMOL] scripts with inline PDB

2004-06-16 Thread Reece Hart
On Mon, 2004-06-14 at 21:04, Reece Hart wrote: > On Mon, 2004-06-14 at 19:20, Michael George Lerner wrote: > > > Have you seen cmd.read_pdbstr() and its companion cmd.get_pdbstr()? I thought I'd post this example, just in case anyone else

Re: [PyMOL] scripts with inline PDB

2004-06-14 Thread Reece Hart
y, I got it working. Thanks, Michael. -Reece -- Reece Hart, http://www.in-machina.com/~reece/, GPG:0x25EC91A0

[PyMOL] scripts with inline PDB

2004-06-14 Thread Reece Hart
Amigos- Does anyone know of a way to embed coordinates within a pymol script? I'd like to be able to programmatically generate a self-contained pymol script which loads the embedded coords, defines selections, and highlights selections with colors/rendering. The immediate use for this is to write

Re: [PyMOL] True Black?

2004-04-27 Thread Reece Hart
hannel), then select by color (Select > By Color..., then click black somewhere), then either 1) fill with the bucket to set the color or 2) cut the selection to make it transparent. -- Reece Hart, Ph.D. r...@gene.com, http://www.gene.com/ Genentech, Inc.