I use these commands:
cmd.reset()
cmd.origin(position=[0,0,0])
cmd.center("origin")
cmd.move('z',-cmd.get_view()[11])
Raluca
On Thu, 09 Sep 2010 12:11:52 -0400
Philip Bransford wrote:
> I am using PyMOL to generate a mesh of a protein. My
>commands look like
> this:
>
> load prot.pdb
> sh
Hi!
I have a pdb file that contains Calmodulin protein with
Calcium ions. I want to calculate the surface. Does anyone
know which is the radius of Calcium in PyMOL library and were
I can find this libray?
Thank you,
Raluca
-
Hi all!
Thanks for the link and the tutorial.
We also have been using PyMOL and Blender for some scientific
animations. Indeed, during the Blender Conference in Amsterdam
last october, we witnessed several presentations of people
using Blender in academics/research setting, and have recently
st
Turning on smooth display also helps.
>
> What exactly are you having problems with? In what way are
>things
> "disjointed" ?
>
> Best,
> Shiven
>
>
> On Mon, Dec 21, 2009 at 6:51 AM, Raluca Mihaela ANDREI
> wrote:
>> Hi,
>> I imported int
Hi,
I imported into Blender (a 3D modelling and animation
software) a surface created in PyMOL and I realized that there
are some disjoint surfaces inside. Is it possible to remove
these surfaces in PyMOL?
Thank you,
Raluca
---
Hi!
Can somebody tell me why I can't create surfaces for the
oligosaccharide chains?
Thank you,
Raluca
--
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Info P
Hello!
I save the surface of a protein as a .wrl, then I calculate
the electrostatic potential and I save again the surface of
the protein. I import the two surfaces in Blender (a 3D
software) and I see that they are shifted. Why does this
happen? Then I open the .wrl files and the .dx file in
Hello!
I save the surface of a protein as a .wrl, then I calculate
the electrostatic potential and I save again the surface of
the protein. I import the two surfaces in Blender (a 3D
software) and I see that they are shifted. Why does this
happen? Then I open the .wrl files and the .dx file in
