RE: [PyMOL] volume approximation

es of equal size. See Torre, Huertas and Carrasco (2000) Journal of Magnetic Resonance, 147, 138pp or http://leonardo.fcu.um.es/macromol/programs/hydronmr/hydronmr.htm Peter -- Dr Peter Teriete Laboratory of Molecular Biophysics Department of Biochemistry University of Oxford South Parks Rd. Oxfor

RE: [PyMOL] PyMOL versus WinXP, SP2

I have v0.98 running on my laptop [1] featuring XP pro with SP2 installed and haven't noticed any problems so far. [1] Systemax, Intel Pentium M (Centrino) 1.6 with an onboard graphics card. Hope that helps. Peter -- Dr Peter Teriete Laboratory of Molecular Biophysics Universi

[PyMOL] Sticks won't ray trace

Hi, I'm trying to get a cartoon model of a pdb file to display a few selected sidechains as sticks, I can see them in OpenGL, but when raytraycing the sticks disappear. Using Pymol 0.96 under Windows XP. Ta for any help or pointers Peter -- Dr Peter Teriete Laboratory of Molecular Bioph

RE: [PyMOL] Coloring gradient

or for a customized gradient? Thanks for any further help. Peter -- Dr Peter Teriete Laboratory of Molecular Biophysics Department of Biochemistry University of Oxford South Parks Rd. Oxford OX1 3QU Tel: +44 1865 275742 Fax: +44 1865 275182 "count" is t

[PyMOL] Coloring gradient

Dear All, I'm trying to color a protein cartoon structure from N- to C-terminal with a green to yellow gradient. Had a browse around and couldn't quite find the correct command. Any pointers are welcomed. Peter -- Dr Peter Teriete Laboratory of Molecular Biophysics Department of Bi

[PyMOL] Coloring surfaces by distance

it's within a certain distance of the selected residues. Thanks, Peter Dr Peter Teriete Laboratory of Molecular Biophysics Department of Biochemistry University of Oxford South Parks Rd. Oxford OX1 3QU Tel: +44 1865 275742 Fax: +44 1865 275182

[PyMOL] rotating electrostatic map

Dear All, I encountered a problem when trying to rotate or translate a molecule with a grasp electrostatic map loaded. I have three identical molecules, one of which has its surfaced coloured according to the electrostatics from a grasp map. When I use the mouse to rotate all molecules, the grasp

[PyMOL] Displaying of an NMR ensemble

Dear All, I have loaded an NMR ensemble into pymol 0.95 and successfully aligned it over the residues of interest, but how do you display more then one at the same time as they are bundled into on object? Thanks, Peter