[PyMOL] Saving Images

2005-12-29 Thread Michael Morbious
Hi everyone, Each time I try to save images, Pymol writes 640x480 pixel image to the file. I wonder if there is a way to save images (png format) other than 640X480 pixel that is default. Any help will be appreciated. Thanks. __ Yahoo! fo

[PyMOL] Aminoacid lining of a tube

2005-11-14 Thread Michael Morbious
Hi everyone, Is there an easier way to select the aminoacid lining of a tube rather than selecting them manually? Any help will be appreciated. __ Yahoo! FareChase: Search multiple travel sites in one click. http://farechase.yahoo.com

[PyMOL] Loading tetramer

2005-11-05 Thread Michael Morbious
Hi everyone, I want to load a biological assembly (tetramer) in pdb1 format. However, when I load it, I can only see one chain not the tetramer. On Command Line: ObjectMolecule: Read secondary structure assignments. ObjectMolecule: Read crystal symmetry information. Symmetry: Found 8 symmetry o

[PyMOL] Superimpose

2005-11-04 Thread Michael Morbious
Hi everyone, I have two similar (closely related) multi-chain structures. I want to merge them and highlight the regions that do not superimpose. However, I do not know how to superimpose these two structures and how to select non-intersecting residues. Any help will be appreciated. Thanks.

[PyMOL] New user needs help!

2005-10-16 Thread Michael Morbious
Dear All, I am a new pymol user. Does anyone know if it is possible to merge four units (all units are same) of a tetrameric assembly by using pymol? Each unit has the same Id and when I load each of them, they overlap. If you please help me, I will be really pleased. Best Wishes,