Hello:
Okay, I got the surface from Grasp read in by ungrasping it in
Raster3d. Now the read in surface loses its electrostatic potential
colouring - is there any way to fix this?
Cheers,
JTM
*
Jason Thomas Maynes
MD/PhD Program
Faculty of Medicine
University of Alberta
Hello:
This might have been asked before but is there anyway to load an
electrostatic surface from grasp into pymol?
Cheers,
JTM
*
Jason Thomas Maynes
MD/PhD Program
Faculty of Medicine
University of Alberta
ja...@biochem.ualberta.ca
*
Hello:
You can create more than one object of the same protein, make one
smooth loops and display only a small section of that one.
Cheers,
JTM
On Sat, 10 Aug 2002, Bartholomeus Kuettner wrote:
> Hello there!
>
> Is it possible to assign "cartoon_smooth_loops" to specific residues of a
> prote
Hello:
To show the allowed torsion angles, run your protein through procheck
(available at http://www.ccp4.ac.uk/main.html), this will show the allowed
areas.
I would say that the convergence of an MD simlulation cannot be told by
torsion angles since the protein conformation with the most allo
Hello:
I am trying to color residues off a cartoon loop and want to color the
sticks version of the residue down to the Ca, but not the Ca itself
(ie. the residue and the cartoon are different colors). The
problem is that if I color the Ca, then that section of the cartoon also
gets colored. If
Hello:
I was wondering if there was anyway to make the cartoon backbone match
the real backbone to a greater extent. Now I have residues displayed as
sticks and a backbone displayed as loop and the loop doesn't really come
near the residue so it looks like the residue is floating in space. I am
Hello:
pymol.com -c scriptname
But you have to get your view first somehow.
Cheers,
JTM
*
Jason Thomas Maynes
MD/PhD Program
Faculty of Medicine
University of Alberta
ja...@biochem.ualberta.ca
*
On Tue, 16 Jul 2002, Nathaniel Echols wrote:
>
