[PyMOL] Exporting individual surfaces results in translation of surfaces

2012-08-21 Thread JP Cartailler
his. Also, I'm imported the individual chain exported surfaces into multiple non-Pymol packages and all have the same issue. If I do not delete the chains after every export, I can of course export all the chains, but I end up with a single piece of geometry, which is not what

Re: [PyMOL] Ray trace is freezing...

2003-08-17 Thread JP Cartailler
pnet.click-url.com/go/psa0013ave/direct;at.aspnet_072303_01/01 > ___ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > -- JP Cartailler 3205 McGaugh Hall Dep

Re: [PyMOL] redhat 9.0/pymol - missing something

2003-08-12 Thread JP Cartailler
packages are needed for pymol to run? JP Cartailler 3205 McGaugh Hall Dept. of Molecular Biology & Biochemistry Irvine Research Unit in Macromolecular Structure UC Irvine Irvine, CA 92697-3900 USA (949) 824 4322 (T) j...@bragg.bio.uci.edu (email) www.cartailler.com (www) On Tue, 12 Aug

[PyMOL] redhat 9.0/pymol - missing something

2003-08-12 Thread JP Cartailler
inter-2.2.1-17.i386.rpm error: Failed dependencies: libtix8.1.8.3.so is needed by tkinter-2.2.2-26 What is libtix? and where can I nab it for readhat 9.0 or just the source? Cheers, JP Cartailler 3205 McGaugh Hall Dept. of Molecular Biology & Biochemistry Irvine Research Unit in Macromolecular St

Re: [PyMOL] Stereo labeled figs?, even with powerpoint!

2003-06-12 Thread JP Cartailler
Just to add a tip to this (should work in illustrator since it does in photoshop). You can use your mouse (instead of the arrow keys), pressing and holding down the shift key before clicking, to mouse the labels and they will be locked to the axis you start your mouse motion with. I have a photos

[PyMOL] command line usage of pymol?

2003-06-07 Thread JP Cartailler
Easy question: Can pymol be run through the command line (with a script as input) without launching the GUI? thanks JP Cartailler 3205 McGaugh Hall Dept. of Molec. Biol. & Biochem. UC Irvine Irvine, CA 92697-3900 USA (949) 824 1797 (T) j...@bragg.bio.uci.edu (email) www.cartailler.com (www)

RE: [PyMOL] RE: [ccp4bb]: Pymol stereo question (fwd)

2003-06-04 Thread JP Cartailler
That's great, thanks for letting me know Warren! I'll work on creating motion paths for the camera to move along and get back to this list about it. :) JP Date: Wed, 4 Jun 2003 13:26:52 -0700 From: Warren L. DeLano To: 'JP Cartailler' , pymol-users@lists.sourceforge.net Sub

[PyMOL] RE: [ccp4bb]: Pymol stereo question (fwd)

2003-06-04 Thread JP Cartailler
Very true. It would be great to have a feature where we have access to a camera object, with control of the: 1. camera root (where the camera) 2. camera target (where it's looking) 3. focal length control 4. and all associated 6D transforms. :) JP -- Forwarded message -- Da

Re: [PyMOL] settings for Adobe Premiere

2003-06-03 Thread JP Cartailler
ers at compressing QT movies for web-delivery... hopefully, this will help you feel free to ask more :) JP Cartailler 3205 McGaugh Hall Dept. of Molec. Biol. & Biochem. UC Irvine Irvine, CA 92697-3900 USA (949) 824 1797 (T) j...@bragg.bio.uci.edu (email) www.cartailler.com (www) On Tue, 3

[PyMOL] Alpha Channel Support

2003-05-02 Thread JP Cartailler
Greetings, Will Pymol soon have alpha channel support? Related to this, it would also be useful to be able to render the Z-layer (Depth) as well. How about additional surfacing features, like surface curvature and color-by-distance-from-atom-X... just my wish-list :) cheers, JP Cartailler