Re: [PyMOL] OS-X question

PyMOLX11 hybrid version? If so, then you need to start up X11.app (or XDarwin if that's what they have) first in order to get the full GUI. Hanspeter -- Hanspeter Niederstrasser, Ph.D.Dept. of Cell Biology hniederstrasser at cellbiology.wustl.edu Campus Box 8228 Coope

[PyMOL] bug with APBS plugin and OSX/X11 hybrid pymol environment?

I've been using the APBS plugin the last couple days and have noticed a bug in the behavior of the plugin. This is using the hybrid X11 version of PyMOL 0.97 on OSX 10.3.5 and Apple's X11. After starting X11, I click the PyMOLX11Hybrid icon and select the APBS plugin from the tcl GUI. Lookin

[PyMOL] creating objects from pdb w/out chain id

I'm trying to create an object of a protein from a PDB file that doesn't give a chain ID (pdb is 1BG2). I normally do something like: create atub=(/1jff//a/) to pull a specific chain out of a PDB file, but 1BG2 doesn't have a chain name. And if i use "create kin=(/1BG2)", the object kin get

[PyMOL] dial boxes on SGI

Do dialboxes that are sold with SGIs work for moving molecules around in PyMOL? They don't seem to do anything out of the box. Hanspeter -- Hanspeter Niederstrasser Nogales Lab nie...@ocf.berkeley.eduhttp://cryoem.berkeley.edu/~nieder/

Re: [PyMOL] Install of Pymol 0.88 from Fink?

On Thu, 5 Jun 2003, Kelley Moremen wrote: > I am having problems getting access to the updated (0.88) version of Pymol > from Fink. After updating Fink and Pymol, my Fink still seems to think that > the 0.86 version is the most up-to-date version. Am I missing something? Pymol 0.88 is only in t