[PyMOL] mutagenesis - dashed yellow lines hide?

2022-11-15 Thread Colin Dolphin via PyMOL-users
During mutagenesis dashed yellow lines appear from the main chain of the new aa with distances attached and they remain when moving through the various rotamer states. Is there a way of hiding these lines and labels? ___ PyMOL-users mailing list Archi

[PyMOL] hiding the main chain for a named selection?

2022-11-02 Thread Colin Dolphin via PyMOL-users
Newbie here. Is there a way to script hiding the main chain for a named selection as per the GUI (H-main chain)? ___ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/pr

[PyMOL] Mutagenesis on apo structure and/or complex with adduct atoms removed?

2022-09-23 Thread Colin Dolphin via PyMOL-users
A single residue change in the enzyme active site confers resistant to inhibitor (adduct). Structures of apo enzyme and complexed with adduct available. Should I do the mutagenesis on the apo or on the complex after removal of the adduct atoms and relaxing the structure? When I align the apo st