[PyMOL] PYMOL saving coordinates of docked molecule

2006-02-09 Thread Brian J Goodfellow
Marylin, try saving using the command line instead of the pull down menu i.e "save newfilename.pdb" This should save everything in one file. Brian -- ******* Brian J Goodfellow Departamento de Química Universidade de Aveiro 3810-193 Aveiro, Po

[PyMOL] APBS

2005-11-19 Thread Brian J Goodfellow
o get a surface in MacPyMOL. Till now I've been generating the surfaces in PyMOLX11Hybrid with the plugin and saving a pse file and then reading it into MacPyMOL, which is not the end of the world I guess, but it's just a bit of a pain.. Cheers, Brian *****

Re: [PyMOL] Mac OS X 10.4.3

2005-11-04 Thread Brian J Goodfellow
l-users-ad...@lists.sourceforge.net [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of Brian J Goodfellow Sent: Thursday, November 03, 2005 2:17 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] Mac OS X 10.4.3 Hi Mac users, has anyone noticed an annoying flickering appearing when rotating a m

[PyMOL] Mac OS X 10.4.3

2005-11-03 Thread Brian J Goodfellow
a ray trace is then drawn the problem starts again until the window is moved again - very annoying! Brian Goodfellow *** Brian J Goodfellow Departamento de QuÌmica Universidade de Aveiro 3810-193 Aveiro, Portugal Tel: +351 234 401506, Fax: +351 234 370084